If there are three molecules in the asymmetric unit of a crystal, then which among the three has to be chosen for docking ?

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Can anyone provide me with molecular docking softwares/ websites?

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Abdeen Tunde Ogunlana

I'll suggest you consult the published paper on the crystal structure (protein) to know which to retain or discard. If you got the X-ray structure from PDB, you should have access to the published paper from the page

Mansoor karimi-jashni

Dear all,

I am looking for a robust software to dock three protein molecules? I could not do it through Cluspro? Thank you.