I want full genome sequence of A.terreus which could produce Itaconic acid .Can anyone assist me,where i get this information?

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I want full genome sequence of A.terreus which could produce Itaconic acid .Can anyone assist me,where i get this information?

Hi to all good ones, I want full genome sequence of A.terreus which could produce Itaconic acid .Can anyone assist me,where i get this information?

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Alberto Vázquez-Salazar

Hi,

It seems that the complete genome of that organism isn't available yet in the KEEG database (http://www.genome.jp/kegg/catalog/org_list.html).

But there's some info you may find usefull:

https://www.ncbi.nlm.nih.gov/genome/?term=Aspergillus%20terreus[Organism]&cmd=DetailsSearch

http://genomea.asm.org/content/4/3/e00491-16

Kandasamy Ulaganathan

Please Consult the following articles

Article Comparative Study on Whole Genome Sequences of Aspergillus t...

Article Complete Genome Sequence of Soil Fungus Aspergillus terreus ...

Loubna Youssar

Wild type strain genome is available however only transcriptomic of the Itaconic acid producer is sequenced (PRJNA296012). It depends on what you are looking for but from my experience, transcriptomic is a good resource. If the authors found out genes highly expressed in conditions related to Itaconic acid, you may clone and sequence them from your strain. Its still sequencing the strain is the easiest way to find out your PKS or gene clusters related to the pathway otherwise you may spend a while to clone the genes meanwhile another group is already working to publish them.