I am looking for a way of representing the binary spoligotyping code in digital format (empty and filled square boxes). Can you suggest some tools?

20 June 2019 1 9K Report

For publication point of view, I need to represent my binary spoligotyping data in digital form.

Hi Vibhuti,

If you mean something like figure 3 in this paper (doi: 10.1371/journal.pone.0192351, you should be able to do it in excel.

Thank you,

Sanjay

More Vibhuti Jain Rana's questions See All

How to do pca analysis of c-alpha atom of the protein?

i m interested in pca analysis of c-alpha atoms in gromacs for that i used the following gmx_mpi covar -s mdca.tpr -f mdca.xtc -o eigenvalca.xvg -v eigenvecca.trr -av average.pdb -n index.ndx but...

30 July 2024 1,607 1 View

Getting this error : gmx_mpi': corrupted size vs. prev_size: 0x0000000001d1b320 ***?

i am using the trjconv command in gromacs gmx_mpi -debug trjconv -s md.gro -f md.xtc -o utr.xtc -fit rot+trans and after few steps i got the error gmx_mpi': corrupted size vs. prev_size:...

17 July 2024 6,216 1 View

How i figuer out the weight of curcumin powder?

I am trying to load curcumin emulsion in 4% chitosan gel but i don not know how many mg powder is needed ?

10 July 2024 2,462 1 View

Any suggestions to enhance the wettability and adhesion of fluorosilanes?

I am facing a difficulty to prepare the thin film which contains fluorine contained silica monomer, as we know F is highly reactive with low surface energy and it could be the reason of low...

09 July 2024 6,017 3 View

Why is the mouse intestinal organoid not forming ?

I am isolating the crypt from mouse small intestine the following several modification of EDTA concentration, 3mM (30 min), 5mM (30 min), 20mM (25 min) at 4 degree. For all the EDTA...

09 May 2024 9,005 2 View

What correction is used when 95%aCI is overlap ?

How we make 95% CI (lower and upper) far, when overlap in analysis, whether we can use effect size to make difference in lower and upper interval

03 May 2024 1,846 2 View

Is Pluriselect a good company to buy kits for cell separation?

I am recently buying kits from Pluriselect to take out (deplete) NK cells and CD4 cells from blood. The main reason me using this is cheap and do not require accessory equipment. But in Pubmed...

02 May 2024 5,861 1 View

WARNING: FENE bond too long: 1 7 8 32968539.141547877 (src/MOLECULE/bond_fene.cpp:83) ERROR on proc 0: Bad FENE bond (src/MOLECULE/bond_fene.cpp:85)?

# Polymer chain simulation with FENE and LJ potential in NVT ensemble # Initialization units lj # Use LJ units atom_style bond # Atoms and bonds boundary p p...

16 April 2024 5,828 0 View

Bond broken in fene potential?

i simulating a single chain polymer with 10 particle with fene and lj but if i increase the no of particle my bonds are being broken . im using parameters as below 20 50000.0 0.1 1000.0 1.0...

15 April 2024 2,748 0 View

How to calculate the center of mass coordinate of the protein in gromacs?

i want to find center of mass coordinate of the protein,for that i using the following command gmx_mpi traj -f md_noPBC.xtc -s md.tpr -com -ox com.xvg -pbc but i m not getting satisfactory...

04 March 2024 814 4 View

Can we mark 'EFL Learners shifting from general digital to AI technologies' as technological transition?

After COVID-19 it has seen that EFL learners technological affiliation has raised. In addition, in the post-COVID period learners started to engage AI technologies like ChatGPT while learning...

08 August 2024 8,964 4 View

Gromacs first step of minimization ?

I have face this problem anyone help me how to solve this issue ?which is below Fatal error: There are inconsistent shifts over periodic boundaries in a molecule type consisting of 78 atoms. The...

07 August 2024 2,598 1 View

What condition of Kirat Rai's participation in politics before and now in Nepal?

The political participation of the Kirat Rai community in Nepal has evolved significantly over time: Historical Context Historically, the Kirat Rai people, like many indigenous groups in Nepal,...

05 August 2024 5,950 1 View

La animación digital en plataformas digitales?

Hoy la animación se utiliza como una tecnología multimedia con gran potencial educativo, que va mucho más allá de sólo crear figuras, ya que puede promover una mejor comprensión en...

01 August 2024 7,186 0 View

Where to download DEM from 2018?

I am currently working on validating land subsidence results obtained using SBAS InSAR. Could anyone suggest reliable sources or repositories where I can download a historical DEM from 2018?...

31 July 2024 9,757 3 View

Recent topic in digital banking?

i need a recent digital banking topic for doing my Ph.d research

29 July 2024 5,210 2 View

Patronage margin difference between offline womens'apparel store and its equivalent online.Is this a good research topic?

I intend to explore and assess how offline womens' modern apparel store are losing out online and the need to get them on board based on this assessment. I am on a student on MPHIL Media and...

26 July 2024 1,440 1 View

How we can use lattice-based cryptography for construction of S boxes?

Please suggest basic literature on lattice-based cryptography. A kind response from the cryptographic community will be highly appreciated.

24 July 2024 6,291 4 View

How to measure the link between a School's digital transformation and competitive advantage?

How to measure the link between a School's digital transformation and competitive advantage? What measurement models to use? Secondary schools are under investigation.

24 July 2024 2,526 5 View

Could international experts in media and journalism, AI, communications and international communication share this conference link?

"Integration of Mass Media and Communication into the System of International Relations: Place, Role, Actuality and Prospects: Modern Media Issues 2024" Website: https://immcir.alnoor.edu.iq/

23 July 2024 3,139 6 View