I have been working with MS data with a Bruker TIMS TOF machine, and on Bruker's Data Analysis software.
I would like to export the data out (e.g. .mzXML, or just .XML), but currently the Data Analysis software only allows doing this one spectrum at a time, so bulk exporting takes ages.
I know Data Analysis supports Visual Basic scripts, so perhaps a loop or other script may enable bulk exporting. Unfortunately I have absolutely no experience with Visual Basic, and have no idea how to even get started, even after reading the manual...
Has anyone out there already written a script to do this? Or have an idea/template of how to start?