Hi

Greetings to all of you.

We have sequenced SARS-CoV2 whole genome sequence using NextSeq and with the fasta files, I managed to translate the file into protein sequence. I have aligned those sequences using CLUSTAL Mega and using Mega 6 also. Now I want to separate the spike protein portion from the whole genome. Anybody can tell me how can I do that and what is the exact spike protein position within the whole protein sequence?

Thanking in advance.

Best regards.

Dr. Shahina Akter

Principal Scientific Officer

Bangladesh Council of Scientific and Industrial Research

Dhaka, Bangladesh.

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