I am tying to simulate the water dynamics in the preservative solutions including two protective agents, trehalose and ε-poly-L-lysine.So I need to put these two diffenernt molecules in one single box and solvate them.
Kindly check https://www.google.com/search?q=How+to+put+two+different+proteins%28or+1+protein+molecule+and+1+sugar+molecule%29+in+one+box+for+MD+simulation+with+GROMACS%3F&client=ucweb-b&channel=sb
Also check https://www.tandfonline.com/doi/full/10.1080/10408398.2017.1341864?scroll=top&needAccess=true
Thanks for your information. Chinaza Godswill Awuchi
I have solved my problem.
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