How can I perform Multiple Sequence Alignment using R software?? Which are the packages needed to be installed for performing this !!
https://stackoverflow.com/questions/4497747/how-to-perform-basic-multiple-sequence-alignments-in-r?utm_medium=organic&utm_source=google_rich_qa&utm_campaign=google_rich_qa
http://bioconductor.org/packages/release/bioc/html/msa.html provides a few good algorithms for msa.
http://www2.decipher.codes/index.html
Thanks everyone for your suggestions....I will try to work it out
There are multiple ways to do it in R. Go through the stackoverflow discussion and choose the one you find easy to use.
package bio3d , then feed resulting alignment files to MUSCLE web .
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