Hello Everyone,
I am using gromacs for MD simulation of the protein-ligand complex.
I am using CHARMM force field but it is continuously showing the following error. I checked and some people reported that using Networkx v 1.11 solved this issue. I also installed v 1.11 but showing the following error.
Traceback (most recent call last):
File "cgenff_charmm2gmx_py2.py", line 51, in
import networkx as nx
ImportError: No module named networkx
It seems that you have not NetworkX.
Try to install it with anaconda.
Gustavo Enrique Olivos Ramirez Thank you very much for your help but still not working. Showing the same error.
Import errors are mostly due to, in case when module is installed, permission or wrong path. Make sure you install the said module with root permission (Sudo) and check if the PYTHONPATH is correct where the module is located.
Possible solutions:
1: Try installing the networkx with sudo pip....
2: Check the location of package with pip show
By this way you can fix the permission or path issues. I hope this works for you.
Best wishes
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