Dear All,

I have SNPs file associated with the sequence of my genes of interest. As the objective is to apply the selection test on SNPs, I need to extract the coding sequences from them; basically, I need to remove intergenic regions and put together all exons!. Could you suggest a relatively simple way of doing that? Is having coordinates and cutting the sequences based on them the only option? seems too much!

Any suggestion would be appreciated.

Thanks

Mah