How to create a spherical wall?

Vinnarasi Saravanan @Vinnarasi-Saravanan

06 May 2022 1 5K Report

Dear All,

I need to put DNA inside the spherical wall (wall radius is 5nm) without any boundary conditions (PBC). Hence, DNA will be confined inside a spherical wall during simulation. Is there any way to achieve this by NAMD simulation?

Thanks in advance

Vinnarasi Saravanan

Dear Zhaoxi Sun,

Thank you very much for your suggestion. It was really helpful.

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