I am working on secondary structure prediction of proteins in MATLAB software using Neural Network (sequence to structure). I determined its structure using NN. I am unable to convert it into 3D structure. Is there any way?
I recommend you to use ball and stick view. For generating balls use
https://uk.mathworks.com/help/matlab/ref/sphere.html
and for producing sticks/cylinders between two points in the 3D space, use:
https://uk.mathworks.com/matlabcentral/fileexchange/5468-cylinder-between-2-points
Sir, i want to make it clear, that the sequence of proteins are in the combination of Amino acids. I have written the algorithm in NN to predict the secondary structure of the proteins.The result displays Helix(H), Strands(E) and coils(C). So the output results will be in the combination of H,E and C.what i need is, this combination is to be displayed in 3D format.Is it possible? @ Arash Rabbani
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