How to construct phylogenetic tree with maximum likelihood in rstudio?

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Vincent Hervé

Dear Jorge Mori-Marin,

If you want to infer phylogeny within a R interface, you can for instance use the package Rphylip:

Article Rphylip: an R interface for PHYLIP

With that you will be able to use the PHYLIP software which includes among many other things, maximum likelihood methods.

Best,

vincent

Jorge Mori-Marín

Thank you very much Vincent, a big hug.