How we can check or calculate the area of interface of optimized poses or confirmers got from autodock tools? If it can be find using biovia discovery studio or any other software please guide me with the steps.
As far as I understand, is the problem in the *.dlg files?
If so, then *.dlg convert to *.pdbqt.
I am trying to analyze lipids in plants; specifically pollen by using Sulfo-Phospho-Vanillin (SPV) Method! Can I prepare a standard curve for this estimation using soybean, sunflower, or olive...
01 July 2024 3,267 1 View
1. I was shocked to discover yesterday that my research citations on Google Scholar had dropped to 2383 from 2419 a week ago, and they are now up to 2391. 2. My citations three months ago were...
28 June 2024 2,846 2 View
Hello everyone, I am currently conducting research on the Oxygen Evolution Reaction (OER) mechanisms in perovskite materials and am particularly interested in studies that utilize Density...
03 June 2024 6,295 0 View
I wanted to express protein in mammalian cells for purification I need 6XHis tag, however, plasmid synthesis company have vector with Myc and his tag. So do I need both or only his tag.
12 May 2024 941 4 View
I needed a detailed methodology for SEM-EDS analysis for Leaf and pollen!
05 May 2024 4,892 5 View
Hi all, I'm looking to mass mark Solenopsis xyloni ants during an experiment. For this experiment, I'm allowing the whole colony to feed on three feeders, and I want to mass mark all the ants...
13 April 2024 9,988 2 View
Hey, I am doing an research on how parenting styles create negative attachment styles in young adults. I can't seem to understand what's the criteria for assessing and how to use it. It would be...
02 April 2024 7,017 2 View
Please share the details of the bonitur scale, its significance, and its relevance in current times.
01 April 2024 2,523 0 View
Hey all! I am looking for help to increase the citation count for my memristor test research. Memristor test is a relatively new area with limited commercial availability for these nanoscale...
27 March 2024 2,373 2 View
Has anyone run slide in Visium of tissue sections (Heart, kidney, brain) with CMC than OCT for spatial transcriptomics ???
14 March 2024 243 2 View
I am seeking experimental or applicable data for the liner (LLDPE) interface in FLAC3D numerical modeling of a large stockpile. Could you please recommend suitable references? The preferred data...
05 August 2024 3,665 0 View
Molecular docking software/ websites?
02 August 2024 8,704 7 View
When I run autogrid4 it says: autogrid4: ERROR: Unknown receptor type: "Cr" -- Add parameters for it to the parameter library first! Look forward to your reply.Thank you so much!
29 July 2024 488 0 View
Good day, I am a student trying to work on Autodock for a project regarding Ligand-DNA interaction so i am quite new to molecular docking. i have followed tutorials and did all the steps...
28 July 2024 2,136 4 View
I wanted to know whether we can observe the synergistic/antagonistic/additive properties of combinations or mixtures of compounds through docking analysis. But during docking preparation any...
28 July 2024 7,413 6 View
I had a problem for so long. I could easily delete elements in ABAQUS implicit solver but I needed to use VUMAT so I had to have Explicit solution but the element did not disappear for so long. I...
23 July 2024 10,032 0 View
A molecule shows the -11.6 kcal/mol and second one -8.0 kcal/mol so why molecule (A) revealed higher binding score. Please explain major factor involve in it.
21 July 2024 954 5 View
I have performed docking of proteins with two ligands, both ligands show affinity. I want to check the effect if we join both ligands and perform docking
20 July 2024 2,653 2 View
I have conducted virtual screening using Schrödinger on a database of 17,000 molecules. Unfortunately, I cannot use the system with the Schrödinger license at the moment. I am trying to find a way...
18 July 2024 2,881 4 View
I have used Schrödinger (Glide) for docking
13 July 2024 3,003 1 View