How one can predict the metabolic pathway using bioinformatic tools( if any) for a novel compound, if the structure of compound is known ?

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Rakeshkumar Yadav

Dear Reza,

The compound's function is already determined, it is inhibiting few gram positive organisms.Structurally it is closest to pyoluteorin. And it is not a protein, it is a secondary metabolite (aromatic in nature)

Thanks for your suggestion, will consider it.

Regards.

Marianne Seijo

On a knowing methabolic organism and a new compound, there is a software call BNICE to see what is occur with new compounds and resulting new compounds created each step of the pathway. You can contact Pr. Vassily Hatzimanikatis ([email protected]), because unfortunately the software is not accessible outside the laboratory. It is the occasion to make collaborations.

Dear Marianne,

I will think about that. Thank you.

Regards