I have made multiple lentiviruses expressing fluorescent protein fusions, which I need to titrate. Unfortunately counting infected cells with FACS is not possible as some of my viruses are expressing Venus tag and the FACS machines in our department don’t have the 514nm laser to visualise. I have tried using 488 but it only shows a proportion of the very bright cells. Another issue is one of my Venus viruses encodes a very low expression protein under its own proximal promoter so its extremely dim (I can only see it on a confocal microscope equipped with very sensitive detectors). I wanted to take advantage of having fluorescence as an infection efficiency indicator (rather than use QPCR and ELISA), but I am not quite sure how to do it this correctly. Does anyone use microscopy to quantify the viral titers? How many cells do you need to count to get reliable quantifications? Many thanks for your help!