Can anyone please suggest me a tcl script for the same. I have tried using a script but its returning the same values for the center of mass for all the residues.
Hi,
Find the center of mass for each selection (com1 and com2 are position vectors)
set com1 [measure center $sel1 weight mass]
set com2 [measure center $sel2 weight mass]
This is the script and the following is the link for further assistance,
http://www.ks.uiuc.edu/Training/Tutorials/vmd/tutorial-html/node7.html
Hope this helps.
Regards
Danish J
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