Hi all
We want to evaluate the harpin loops index of a DNA sequence. Does anyone know any software/server that can help us?
Thanks in advance
I do not know what a "hairpin loop index" is. However, you may find the DNA folding option of mfold useful in determining structure and thermodynamics:
http://unafold.rna.albany.edu/?q=mfold/DNA-Folding-Form
Thank you Petra
Hi Carlos,
For our purpose we have used Inverted Repeats Finder (IRF, version 3.05).
Article Inverted Repeat Structure of the Human Genome: The X-Chromos...
Thank you Fedor.
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