GenAlEx – Science topic. Does someone know how to make a dendrogram of Genetic Distance in GeneAlex?

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Can we mark 'EFL Learners shifting from general digital to AI technologies' as technological transition?

After COVID-19 it has seen that EFL learners technological affiliation has raised. In addition, in the post-COVID period learners started to engage AI technologies like ChatGPT while learning...

08 August 2024 8,964 4 View

How to generate a citation of my paper from ResearchGate?

How we can cite the papers from ResearchGate. I am trying to create citations for this article, Quantum Machine Learning Algorithms for Optimization Problems: Theory, Implementation, and...

08 August 2024 6,690 3 View

Does Anyone have expertise in in vitro transcription and RNA pull down assay?

I am currently working on LncRNA; to know the lncRNA-protein interactions I want to do RNA pull down assay, so I need to design primers with T7 promoter. I need assistance in this regard.

07 August 2024 6,622 1 View

How to fix background error in rietveld refinement of one XRD peak using GSAS-II?

I want to refine one XRD peak of my in-situ xrd but the background is never working good which ultimately fails the refinement. How to refine and adjust the background using GSAS-II

05 August 2024 5,291 2 View

How can I add own Henry coefficients in Aspen Plus?

Hi, i would like to simulate an absorption process in Aspen Plus. I want to use the NRTL model und would like to add some individual Henry coefficients. Is that possible and how?

05 August 2024 2,333 2 View

Why might the impedance values for DI water and 0.1X PBS buffer solution exhibit a decreasing and increasing trend, respectively over time (HP 4194A)?

Hello everyone, I'm encountering an issue with my electrochemical impedance spectroscopy (EIS) measurements and would appreciate some insights. Experimental Setup: Electrodes: Gold interdigitated...

05 August 2024 3,783 2 View

Can usage of AI tools like chat GPT in research work is recommendable ?

AI tools like ChatGPT can enhance research work significantly when used responsibly and in conjunction with thorough human oversight.

05 August 2024 1,842 3 View

Usage of internal standards in LC-MS/MS analysis?

Have you ever seen a LC-MS/MS method uses both internal standards and external standards (in matrix matching purpose) but the concentrations of internal standards are outside the calibration curve...

05 August 2024 3,084 6 View

ANY free software for reconstructing neurons in the microscopic image?

Hi everyone, I am working on brain slices for visualizing a protein in the soma and dendrites, using a fluorescence tag. However, I need a tool (not paid) for reconstruction of the whole neuron,...

04 August 2024 4,725 2 View

How effective is the Citi Bloc standard basket in enhancing the accuracy and comparability of international construction cost assessments?

Citi BLOC Standard Basket Definitions: A standardized unit representing a fixed basket of construction materials, labor, and equipment costs priced in various cities. Purpose: To create a common...

04 August 2024 8,997 1 View

How to make the input file for genAlEx software for SSR markers?

I want to study the genetic diversity and population structure of my samples using SSR markers. The PCR products of my samples show many bands of different sizes. and i am confused about how to...

06 March 2024 3,177 1 View

Difference in Binary Diploid, Binary Haploid, Haploid data types in GenAlex 6.5?

Please help me understanding the difference in Binary Diploid, Binary Haploid, and Haploid data types in GenAlex 6.5. I want use a binary dataset (RAPD) from fungal species which has a haploid...

14 February 2024 9,258 3 View

How can I use ISSR scoring data in GenAlEx for Principal Coordinates Analysis?

I am currently working on some plant species ISSR scoring data, which consists of 0s and 1s. I would like to perform a Principal Coordinates Analysis (PCoA) using GenAlEx. Could someone guide me...

07 January 2024 4,205 1 View

What is the best software to analyze genetic diversity for large SNP dataset (~67K SNPs)?

I need to calculate number of different and effective allele for a diversity study using large SNP dataset. Normally I use GenAlex but I can't load the data due to limited no of columns. Please...

01 January 2024 6,128 2 View

Which software to create a beautiful dendrogram in diversity analysis from the dissimilarity matrix or binary coding for the molecular data ?

Diversity, Dendrogram

05 December 2023 7,372 0 View

How we can create a dendrogram and Jaccard similarity matrix using 0-1 gel data?

I would like to create a dendrogram and Jaccard similarity matrix using 0-1 gel data. However, I do not have access to NTSYS or any other specialized software. Is there an alternative method to...

23 November 2023 1,636 0 View

Which software is freely available to produce dendograms/ hierarchical clusters for plant characterisation data (morphometric)?

This question relates to producing dendrograms for large datasets from 30-40 sets of morphometric data.

18 July 2023 5,048 3 View

Please advise me on how to use the GenAlex software?

How do I prepare data from an issr marker gel for analysis with the GenAlex program, and how do I determine the number and percentage of polymorphic loci, the average and effective number of...

08 November 2022 8,942 3 View

Help importing aligned sequences to GenAlEx?

Does anyone have tips or recommendations for importing aligned sequences to GenAlEx? I keep getting an error message that says my file does bot conform to the Nexus format. I can get GenAlEx to...

17 October 2022 9,531 0 View

GenAlEx - Were we right on the interpretation about the genotype discriminated?

We did analysis of the probability of identity (PID) in GenAlEx to see the likelihood that sexually derived individuals can be discriminated using eigth loci. Were we right on the interpretation...

16 October 2022 3,471 0 View