G-Helix and number of residues in a helix ?

Prasun Kumar @Prasun_Kumar6

03 March 2017 1 2K Report

Hi All

I have been trying to use "G_helix". However, I am encountering a rather strange situation:

I am not able to run the command when the number of residues is less than 20 (say 19).

It is working fine for a helix with more than 20 residues.

Please guide me and suggest any alternative, if possible.

I have used the command:

g_helix -s *.tpr -f *.trr -cz *.gro -n index.ndx

Thanx in advance

Prasun Kumar

Thanx alot for the response, but do_dssp is giving segmentation fault. That is why I switched to it. Any way, I will try again and check more thoroghly....Thank you once again

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