Dear everybody,
I'm posting this question because I'm facing a problem with the NCBI database. I should download all the species that belong to a particular phylum (Nematoda) with name and NCBI ID to make them analyzed by software we are using in my lab but I'm not able to do it. I'm just obtaining a .txt file with name and genome ID which of course is not being recognized by the software because it needs the entire NCBI ID which is made by an alphanumerical code. Do someone of you have any idea how to download the species from the Nematoda phylum correlated with the NCBI ID of each species?
Thanks in advance for the answers
I was also facing the same problem some years ago but by changing the settings in windows setup, that problem was resolved but I forgot the exact settings but you can try... in this direction.
If you have IDs or accession numbers, you can retrieve the related records from Batch entrez https://www.ncbi.nlm.nih.gov/sites/batchentrez
Read the description before using the tool.
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