Many visual phenomena are noted after an iridotomy. Is an altered contrast also noted after iridotomy?
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29 January 2024 491 6 View
Hi, all I am new to umbrella sampling, I have the done simulation of 2 gold nanoparticles coated with ligand and interaction with 2 different groups: Case 1: with atp Case 2: water But my PMF...
12 October 2023 4,666 0 View
I am facing this error while nvt simulation constantly i am done trying adding -dflexible flag using steep integrator during em also and nvt,mdp also,still error persists how to resolve it , i am...
28 March 2023 3,608 0 View
Using 1 MPI thread Using 8 OpenMP threads WARNING: Using the slow plain C kernels. This should not happen during routine usage on supported platforms. Back Off! I just backed up em.trr to...
27 February 2023 1,721 1 View
I have synthesized Ag nanoparticles in DI water. Now I want to use the Ag nanoparticles with a flexible polymer to make a thin film. I tried centrifuging at 5000 rpm for 10 mins. However, the...
12 February 2023 5,673 4 View
gmx mdrun -deffnm nvt Back Off! I just backed up nvt.log to ./#nvt.log.1# Compiled SIMD: SSE4.1, but for this host/run AVX2_256 might be better (see log). Reading file nvt.tpr, VERSION...
15 December 2022 8,668 1 View
Input command : gmx grompp -f md_pull.mdp -c npt.gro -p topol.top -r npt.gro -n index_ligand_au.ndx -t npt.cpt -o pull.tpr -maxwarn 3 :-) GROMACS - gmx grompp,...
29 November 2022 7,685 1 View
i am trying to do umbrella sampling of 2 AU molecules but whenever I am trying to run the md_pull.mdp file it giving an error : ERROR 1 [file md_pull.mdp]: When the maximum distance from a pull...
22 November 2022 1,316 1 View
How can I calculate center of mass for a molecule(AU)? Hello every body I want to calculate the center of mass for a molecule I want to know which atom the center of mass hold on. pleas give me a...
22 November 2022 5,774 5 View
I have been trying to extract DNA from Candida isolates in a 96-well setup by using self-prepared buffers. However, after the lysis step when I am adding potassium acetate to the pellet all I am...
19 February 2022 2,174 3 View
i am unable to interpret why its increases in start as shown in figure
11 August 2024 2,179 1 View
I am using Rhodamine6G as gain medium and silver nanoparticles as scatterers on a microscope slide and laser input 532 nm comes from above.
09 August 2024 9,894 2 View
Hi, I'm currently working on a project where I need to plot the atom-projected band structure using GPAW. I've been able to calculate the band structure for my material, but I'm having trouble...
07 August 2024 269 3 View
Visual Studio Code (VS Code) has become a popular choice among developers for several reasons: 1. **Free and Open Source**: VS Code is free to use and open source, making it accessible to...
07 August 2024 7,013 4 View
I am interested to know the behavior of dyes toward light. Specifically, Blue dyes re-emit the spectrum, especially from the green zone (known as principal in LED lamps, and blue dyes are known...
05 August 2024 3,290 1 View
There are three operating parameters - the laser power, the diameter of the focus spot and the scanning speed. It is necessary to obtain a seam of a given depth without pores. What parameter...
27 July 2024 7,168 2 View
Hi all, My lab has Thermo Scientific™ Invitrogen™ EVOS™ FL Auto 2 Imaging System, and I was wondering if I will be able to use it with whole blood, whilst focusing on platelets? The idea would...
24 July 2024 9,337 3 View
Though much literature suggests fitting a Voigt profile on a LIBS peak, is it also possible to fit a Gaussian profile on the LIBS peak? I have 204 spectra files, and I am building a pipeline for...
23 July 2024 6,127 1 View
Hello, I am searching for the binding position of a drug in a ribosome, based on previous work indicating it binds there. The resolution of the ribosome-drug Cryo-EM map is around 2.5 Å. I've been...
19 July 2024 2,155 0 View
I would like to use biofilmQ to analyse confocal laser image, how can do?
16 July 2024 7,628 2 View