Does anyone know how to find the SDp (Shine Dalgarno positive) and SDn (Shine Dalgarno negative) in a bacteria species?

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Masood Sepehrimanesh

Hi dear Akram

Please find the attachment enclosed "Predicting Shine–Dalgarno Sequence Locations Exposes Genome Annotation Errors".

It maybe help you to find your answer.

Cheers

Akram Abolbaghaei

Dear Masood,

Thank you very much for your email. I know there is a program in Java or perl that might be able to do the analysis. I'm not an expert in programming.I was wondering if you have the knowledge of Perl or Java

Best Regards,

Akram