How to anchor for the omic circos plot using a set of genes?

#Initialize value seg.name

06 July 2018 5,725 0 View

How to create a documentTermMatrix from a Corpus?

Im splitting my text and creating a corpus: > newdata Corpus = Corpus(VectorSource(newdata)) Corpus contains all the characters that...

03 April 2018 486 0 View

How to solve error Error in G[i, ] : subscript out of bounds when using Drivernet R ?

Im importing a 412 x 31 matrix: dat

03 April 2018 1,400 0 View

How to create a DocumentTerm matrix?

I'm trying to feed a corpus into a DocumentTermMatrix (dtm) to analyze, but I noticed that dtm doesn't keep all terms (for example, I have terms with parenthesis and semicolons that I would like...

10 November 2017 4,014 1 View

R package that analyzes cyto SNP 850K data?

What R package is available to analyze data from an Illumina cyto SNP 850K dataset?

07 August 2016 9,207 0 View

What is the best way to create a matrix from the most frequent terms (say 50) in a DocumentTermMatrix?

04 May 2016 9,771 2 View

R package best to analyze driving mutations?

What packages are suited to explore driving mutations?

04 May 2016 5,217 0 View

Any suggestions on what kind of material can absorb or reflect a 9.2 GhZ radar frequency?

material that can absorb or reflect up to this frequency.

31 December 2015 1,855 3 View

Does anyone know what version of R to run with EBImage package? Are there any other image packages in R?

Any other image processing and analysis package that one may use in R.

31 December 2015 3,382 6 View

How can I scale a matrix of 25 columns in R?

08 September 2015 4,596 2 View

Could you recommend any books about Number Theory?

Beginner level books. High level books. Analytical Number Theory. Algebraic Number Theory. Combinatorical Number Theory. Books about partitions. Books about primes.

03 March 2021 7,174 5 View

How to normalise data on OPM package from R Studio ?

Good afternoon, I recently used OmniLog from BIOLOG for my experimentations : I tested the metabolism of different strains on 2 types of plates. I have 16 strains of 3 different groups...

02 March 2021 3,584 1 View

How to repeat an operation on an atom selection for multiple times in PyMol?

Hi, I am trying to construct a multi-layer fibril structure from a single layer in PyMol by translating the layer along the fibril axis. For now, I am able to use the Translate command in PyMol...

02 March 2021 4,569 4 View

How to calculate average trend in maximum annual NDVI from MODIS?

I am wanting to calculate the average trend in maximum annual NDVI in Iceland from 2010-2020 using MODIS MYD13Q1 V6. How would I do this? I have currently inserted the NDVI bands from the MODIS...

02 March 2021 752 2 View

Timeout error!! Processor in the loop (PIL) using STM32F4 Matlab 2018a?

Dear Researchers I am trying to perform a PIL simulation using STM32F4 Discovery board and comunication serial USB TO TTL. During simulation I receive the following timeout error: An error...

01 March 2021 2,327 1 View

Why does two different bioinformatics tools for the same proteins show different subcellular localizations?

During a computational analysis, I found that for a protein of a plant, two different subcellular localizations are seen using CELLO and WoLF PSORT. For example, in CELLO, it identified the...

01 March 2021 6,729 2 View

What is the most suitable server for predicting protein structures in bacteria?

I have used the i-Tasser several times, however it has been unavailable for several days. I tried the swiss-model, but the output was not very pleasant due to the model used. Is there any other...

28 February 2021 4,521 3 View

How to eliminate Steady state error from Reinforcement learning genetic algorithm code?

The following code (see 1st 2 images attached) is used to produce PID controller values that are designed to control the system (G). The code finds the PID controller values (noted as k) by using...

28 February 2021 6,560 14 View

How to prevent ANFIS Model from negative prediction values in MATLAB?

I have input and output data set for "ANFIS modeling in MATLAB", and I am getting some negative predicted values of output in testing. However, the predicted values of output in training are...

28 February 2021 3,459 3 View

What is the difference between genotype and haplotype data in the ped format?

Hi everybody In the ped format for genotype, alleles of any SNP are represented by two columns (one for each allele, separated by a space). Is a column sufficient for the haplotype to...

27 February 2021 1,965 1 View