Conservation score of amino acids from MSA?

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Stefan Ivanov

This server does exactly what you need - you provide an MSA and you get per-residue sequence entropy scores, which are a measure of per-position conservation:

http://imed.med.ucm.es/PVS/

The paper can be accessed here:

https://academic.oup.com/nar/article/36/suppl_2/W35/2505815

Hasan Alanya

Thank you very much @Stefan and @Pritam for your suggestions.