Here I have attached the screenshot of the simulation where a bond is shown between N-terminus and C-terminus atoms. I want my background to be white, so unfortunately, the default color of the bond is also white which makes the bond not that properly visible. Is there any way we can change the color of the bond in VMD.
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Abdallah Sayyed-Ahmad
Graphics→Colors...→labels→bonds→black (or other desired color)
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M. Florencia Martini
You can change the color of the structure you want (atoms, a specific selection,etc) in the way that Abdallah Sayyed-Ahmad said. When you enter to Display→Colors, you are entering to the color control of all the structures of your visualization. You need to choose the right cathegory, that's all. In this case, it is Labels, as Abdallah has said.
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