I work with micro satellite markers on nematodes. Would it be possible to generate genetic diversity and polymorphic content of the markers using excel? Or are there any simple ways to calculate this.
Thank you.
dear Lily Fatdal
GenAlex software (based on excel) is Helpful for your calculations.
This is the download link
http://biology-assets.anu.edu.au/GenAlEx/Download_files/GenAlEx%206.503%20Download.zip
You can also use the online calculator.
http://plantmolgen.iyte.edu.tr/GDdom/
You can also use PowerMarker software, which is user-friendly.
Dear Lily Fatdal
You can calculated allele frequency by using of gene POP software and PIC from formula:
PIC=1-(P21+P22+P23……..)
https://www.researchgate.net/profile/M_El-Sayed2/contributions
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