I made pdb structure from SWISS MODEL using reference sequence which i obtain from the NCBI. So now i need to mutate the structures of that protein. I'm going to edit this mutations using pymol mutagenesis tool. Actually i need to know that method is acceptable or not for a docking research. I hope to check edited structures through PROCHECK sever before i do my protein-protein docking. Mutations were obtained from reliable sources and research articles.
Zahra Al-Khafaji
I think you can do it , BUT , I think you need to confirm it with other tools , probably Discovery Studio Visualizer OR PyRX.
good luck
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Lorenzo Briganti
You can definitely use Pymol to do that. You can confirm with other visualization tools, and also opening your .pdb in a notepad or other text editor.
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