following error I found, While trying to run NAMD
Attempt to connnect to the simulation timed out!
NAMD Logfile:
Reason: FATAL ERROR: DIDN'T FIND vdW PARAMETER FOR ATOM TYPE HB1
-type
(procedure "AutoIMD::autoconnect" line 15)
invoked from within
"AutoIMD::autoconnect"
invoked from within
".autoimd.win.controls.connect invoke"
("uplevel" body line 1)
invoked from within
"uplevel #0 [list $w invoke]"
(procedure "tk::ButtonUp" line 22)
invoked from within
"tk::ButtonUp .autoimd.win.controls.connect"
(command bound to event)