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Questions related from Jagadeesha Poyya
I faced a FATAL error while preparing Docked Proteins for MD simulation using Amber20. But this error does not occur while performing with non-docked protein structures. Is this problem is due to...
05 January 2022 1,712 3 View
following error I found, While trying to run NAMD Attempt to connnect to the simulation timed out! NAMD Logfile: Reason: FATAL ERROR: DIDN'T FIND vdW PARAMETER FOR ATOM TYPE HB1 -type...
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I need to create topology file for new ligand using CHARMM36 force field. There lot of error generated stating that, 'Topology for Atom is not found'
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