I tried to run this function sitetest to perform Site-level Differential Methylation Analysis using IMA package but I got error message.
sitetestALL = sitetest(dataf,gcase="KO",gcontrol="WT",testmethod ="wilcox" ,Padj="BH", rawpcut = NULL,adjustpcut =NULL,betadiffcut = NULL,paired = FALSE) and I got this error message: Error in wilcox.test.default(x[1:length(lev1)], x[(length(lev1) + 1):(length(lev1) + : not enough (finite) 'x’ observations
Can you help me to solve this problem?