Online Shopping Security Survey?

I would appreciate if you answer my DBA research questionnaire. Thank you all in...

10 February 2021 1,990 3 View

Suggestions for a Western Blot Analysis of FAT1. Are there 1Kd Protein ladders?

Good afternoon, I am running a Western Blot Analysis of a FAT1 gene knockout that I established in an epithelial cell line. I have performed the Western Blot once, using a gradient gel. However,...

08 October 2019 9,565 3 View

How to test for mediator when I have a binary outcome?

I have a longitudinal data on employee's age (continuous), whether they left the company or not (binary), and 3 year's performance rating (on a 5-point scale). However, not many employees have all...

24 July 2018 8,664 5 View

Doxorubicin staining in cytoplasm. Any help on how to eliminate the cytoplasm staining?

17 May 2016 4,907 2 View

How to manually calculate p value in ANOVA? what is the equation or formula for it?

How to manually calculate p value in ANOVA? what is the equation or formula for it?

03 March 2021 4,928 5 View

Is it necessary to report effect size (ES) in statistics of biomedical research given that we already report p values routinely?

Pls share your thoughts

01 March 2021 7,330 4 View

How to calculate Ligand-active site distance in a ligand-protein complex from MD simulation?

I have run a MD simulation of a ligand-protein complex in GROMACS using CHARMM forcefield. Reviewer has asked me to calculate Ligand-activesite distance and binding free energy of ligand with...

27 February 2021 4,703 1 View

What are the potential shell well and atomic solvation parameters for the boron atom?

I have a protein-ligand docking project. The ligand contains boron atoms that are not detected by Autodock software. To solve this problem, it is necessary to introduce the boron atom to...

19 February 2021 1,236 1 View

How long does it take to design and validate transition state analogue inhibitors?

Hi, I'm asking from the point of view of designing a research plan: How long (approximately) can it take to determine the transition state structure of an enzyme substrate using kinetic isotope...

14 February 2021 2,610 1 View

How to check if the PMF profile obtained from ABF simulation is correct?

I am doing ABF simulations to calculate ligand binding enegy. The PMF profile that I get using single long ABF simulation is attached as pmf_total.png. When I do this ABF calculation with 10...

10 February 2021 4,170 2 View

How to properly reach normality in residuals with lmer?

Hello, I have a large non-balanced panel dataset regarding a company dealing with private lessons for students. My goal is to fit a lmer model which predicts the number of monthly hours taken by a...

08 February 2021 2,539 7 View

Ligands with 3,4,5-trihydroxyphenyl group?

Hi In the design of a bidentate ligand with imine group, is it okay to have a 3,4,5-trihydroxyphenyl group in the structure? In other words, does the 3,4,5-trihydroxyphenyl group compete with...

08 February 2021 4,977 7 View

How to Remove different version of atom from pdb Crystal Structure for Docking Preparation?

I am new to Docking and MD, and currently try to catch on it. I try one of the webserver for docking, but unfortunately not working. it says " Your PDB contains multiple forms of the same residue...

08 February 2021 7,426 3 View

How could I get the P-value from the mean, SEM, and n of different groups in the t-test?

How could I get the P-value from the mean, SEM, and n of different groups in the t-test without the original data? For detail, I would like to know the P-value between BMP-2: 50ng/ml group and the...

06 February 2021 6,539 4 View