I have a VCF file with SNPs using the IGV program, when uploading the file some SNPs that are observed in a particular gene in IGV, when verifying it in GDV or Ensembl do not match
Thanks Sven I have my database of SNP in VCF i load them in IGV, i use cow (bos tau8) and look the position an associated gene. When I compare with another genome database for example Ensembl the position does not match