Can any one help me with molecular dynamics analysis (Schrodinger software) ?

More Dinesh S L's questions See All

Sample dilution for quantitative analysis using ELISA?

If the detection range is in ng/ml but the reference range is in ug/ml for a molecule or protein in serum or plasma .how to dilute and what is the initial volume to be taken for quantitative analysis

02 March 2021 7,670 3 View

What are the new 2D nanomaterials were used for Silver nanoparticles stabilization?

In the stabilization of AgNPs are vital in current research interest. However, some of the 2D nano-materials like graphene oxide, MoS2, etc... previously used to stabilize it. But still they shown...

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Can someone suggest a way to prepare slides to observe under confocal microscope for observing fluorescent tagged proteins??

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What information can be had from raman at higher wavenumber?

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What are the methods used for CNT..?

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Langevin Dynamics in shear flow?

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How we can measure Kemp % in wool without using of benzene?

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21 February 2021 7,260 4 View

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Hi..how to isolate crude HDL (all subfractions) from human serum by size exclusion chromatography?

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What is the reason film thickness increased?

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MD MOE RMSD

How to calculate the RMSD values for a MD simulation using MOE?

07 August 2021 0 0 View

MD MOE RMSD

How to calculate the RMSD values for a MD simulation using MOE?

07 August 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

fatal error

16 June 2021 0 0 View

fatal error

16 June 2021 0 0 View

fatal error

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How to compare two groups with only two measurements?

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Enhanced Yellow Fluorescent Protein (Aequorea victoria) DNA sequence?

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What kind of fluid could I use for a pitfall trap that also does not invalidate molecular testing?

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What's the best way to measure growth rates in House sparrow chicks from day 2 to day 10?

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Shaban Ahmad

Dear Dinesh S L

You can contact me at [email protected]

We can run up to 100ns Dynamics using Schrodinger.

Abdullah Al Marzan

Dear Dinesh,

You know, Desmond is kinda handy compared to other simulation software. But Desmond needs UPS or a high-performance laptop to run MD simulation simultaneously. And Compared to Desmond YASARA is kinda more accurate and user-friendly

regards

Marzan.