Has anyone used BEAST (Bayesian Evolutionary Analysis Sampling Trees) for looking at beta lactamases? Any microbiologists, geneticists, evolutionary biologists please message me if you have used this software before.
Thanks,
Bruno
Hi, I recently checked the mutations in two different enzymes and the result I got with Protein Variation Effect Analyzer (PROVEAN) was that the mutations are deleterious. Does anyone have any...
04 May 2015 1,760 0 View
I ran plasmids on PFGE apparatus previously but has anyone else ran plasmids >20kb to 150kb on on ordinary gel and known what the actual size is? thanks, Bruno
02 March 2015 7,876 4 View
I have 16S gene sequences and some of them are quite different. When I create a tree using mega I can see that they are closely related but not very close? Whats the criteria for classifying...
02 March 2015 6,157 11 View
Hello experts, Does anyone know any free software about retention index prediction ?
08 August 2024 7,403 2 View
Molecular docking software/ websites?
02 August 2024 8,704 7 View
Hi guys If anyone is currently working on aging cells, you guys would like to give me some advice. I'm testing against biomarker (SA-beta-Gal), I encountered a false positive in the control group...
02 August 2024 6,735 1 View
I created a file with my outgroup and ingroup species using Beauti, ran it in BEAST, viewed it in Tracer, and then used TreeAnnotator to create a file that I imported into RASP. Could someone...
28 July 2024 2,979 1 View
I created two potential gene expression cassettes (constitutive and inducible) for expression of a mutant PETase gene on PeptiCloud using the version tree feature, which allows users to create...
28 July 2024 7,559 1 View
Please, what is the memory consumption of the Matlab function quad tree decomposition procedure [S = qtdecomp(I)] with respect to the input set I?
27 July 2024 5,455 2 View
I am currently working on a regression model for a project and considering using both Random Forest and Decision Tree algorithms. Given that Random Forest is essentially an ensemble of Decision...
23 July 2024 4,306 3 View
I am reaching out to seek your valuable advice and recommendations regarding the best software tools to use for this research. Specifically, I am looking for software with a user-friendly...
22 July 2024 3,794 1 View
Hey all, I need help testing for multivariate outliers using STATA for my master thesis. The literature recommends the Minimum Covariance Determinant (MCD) (Verardi & Dehon, 2010). I found the...
22 July 2024 8,821 2 View
Dear Researchers, My question is associated with the "MDCI" method in Orca. Please let me clarify my question using a simple example: Suppose we are going to perform CBS extrapolation using "!...
21 July 2024 1,632 0 View