Am a beginer in metagenomics .. Please suggest some study further can be analyzed using the fastq data of 16srRNA metagenomic data?
Article Tax4Fun: Predicting functional profiles from metagenomic 16S rRNA data
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28 June 2024 3,960 1 View
Hi there, I have some 16S and metagenomic sequencing data from mice fecals and I want to upload them to NCBI Sequence Read Archive (SRA). I don't know what NCBI package is suitable for my animal...
03 June 2024 9,451 3 View
I am a Nigerian researcher working on microbial diversity of an African fermented food product. I will appreciate it if l can get a location and price for shotgun metagenomic sequencing.
20 April 2024 2,536 2 View
Does anyone have any advice regarding 16s metagenomics and an appropriate sequencing depth and paired end reads. Expecting around 10-15 organisms within the samples. Thank you :)
18 March 2024 636 2 View
In the latest CAZy sequence list (http://www.cazy.org/), over 3,600,000 sequecnes have NCBI accession and they can be easily accessed. However, the remaining 550,000 sequences only have a jgi...
13 March 2024 2,439 1 View
full title: metagenomics and alternative approaches for the fundamental study and exploitation of telluric microflora "alternative approaches" here means metaproteomic and metatranscriptomics ?
03 March 2024 1,778 3 View
Hi all.. I am seeking advice on the preferred method for sequencing a bacterial 16S metagenome: Illumina platform or Nanopore method? Any insights or experiences would be appreciated. #sequencing...
24 January 2024 7,679 2 View
In a metagenomic library profile desired size is 450-550bp,getting unwanted fragments which is causing failure of the library or it is difficult to get the desired data after sequencing.
25 December 2023 8,798 2 View
I have red poultry mite samples which have been stored in ethanol. Now I need to perform RNA and DNA extraction followed by shotgun metagenomic sequencing. I would like to know if there is a way...
11 December 2023 6,163 3 View
What is the best way of metagenomic analysis using multiple rDNA amplicons (e.g. multiple 18S and ITS for each sample)? What methodology would you use to reliably normalize and integrate the data...
21 November 2023 8,887 3 View