When I used soap2 for performing alignment, the 2bwt-builder failed as my reference genome is too big. Does anyone know how to solve this problem?
Thank you!
I have a dataset, called data 1) data.dist=vegdist(data) # get the bray-curits distance 2) prediction.strength(data.dist,M=10,clustermethod=pamkCBI,diss=TRUE,usepam=TRU) # I hope to do the...
31 December 2015 4,713 2 View
Does any know how to convert solid csfasta to fasta file? And is there any problems involved in it? Thank you! The csfasta data is something like this: >...
31 December 2014 4,466 0 View
Any suggestion?
10 November 2014 5,689 7 View
The link is right here :http://www.hmpdacc.org/doc/sops/reference_genomes/metrics/Bacterial_CoreGenes_SOP.pdf I do not understand some points in it clearly: If the query is the amino acid...
09 October 2014 3,275 1 View
Does it equal (mapped reads number / contig length)? Or something else?
09 October 2014 9,783 0 View
how to deal with the error as below? Read 30000 itemsError in est.cov(cov) :Cannot identify reliable trusted k-mer coverage peak. Please verify the integrity of your dataset (e.g. by running...
08 September 2014 2,211 0 View
I would like to learn more about SPSS and Its application especially in regards to data analysis. Please suggest me how I can learn more about it. Thank you so much.
11 August 2024 9,101 4 View
I have reverse sequences (AB1 format), can I base on reverse DNA sequences to perform nucleotide alignment, convert nucleotides to amino acids and deposit the sequence in GenBank database?
11 August 2024 5,138 1 View
I am developing a predictive model for a water supply network that involves 20 influencing points. However, I only have historical data for 10 out of these 20 points. I would like to know how to...
10 August 2024 4,005 2 View
I'm currently exploring the application of Python in textile engineering, specifically in areas like data analysis, process automation, and the development of smart textiles. I'm interested in...
10 August 2024 7,429 2 View
Hello all, I wanted to know, can I use galaxy (USA, Europe or Australia) platform for analyzing the shotgun data, and can it be used for publication purpose as well? Thanks :)
06 August 2024 6,610 4 View
Do experts have journals in the field of artificial intelligence and big data that are not indexed by SCI or EI?
05 August 2024 8,836 2 View
Better ways to analyze the qualitative and quantitative data in a sequential explanatory mixed method approaches
04 August 2024 2,703 6 View
How can I interpret the data gathered without solving?
03 August 2024 9,054 3 View
TEP presentation caption (The Environmental Project) Re: Why should Washington’s DC, or any country government point of location think of as nowadays of as to being 'tomorrow as to come! if it...
03 August 2024 2,484 1 View
Given that the bacterial genome has over 800 contigs, but its quality metrics are good, with a completeness of 98.55% and a contamination of 0.68% as assessed by CheckM, what specific validation...
01 August 2024 1,514 1 View