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Questions related from Yong Jia
Just wondering how to perform multiple sequence alignment for extremely long sequences, say several Mbs or even more than that. Any specific tool designed to do this? Thanks :)
25 February 2021 1,111 4 View
Hi, This may be a stupid question, but I still get confused sometimes. These are definitely two different methods, however, both could be used for marker development and genetic diversity...
05 May 2016 4,403 2 View
Hi, Anyone has a step by step instruction on how to install autodock plugin in pymol? I am using the windows version of pymol. In particular, what shall I do after I download the...
01 May 2015 8,134 13 View
I got a problem while using Autodocktools, when it comes to Run-->Autogrid or Autodock, there is always an error as the attached figure shows. I tried both window and linux versions, both of...
14 April 2015 1,338 10 View
Hi, I am dealing with a very tricky protein model, the R-free value after extensive refinement using phenix maintains at above 0.3. inspection on the electron density map shows that the model and...
13 February 2015 3,982 20 View
After a search for a suitable phylogenetic tree using RAxML, how can I compute the Bayesian posterior probability for the resulted tree. What programs shall I use? Thanks.
21 January 2015 6,716 11 View
Hi, I am about to carry out a few enzyme assays. After protein purification and dialysis to remove the salts, what is the acceptable maximum time to keep the protein at 4 degree before performing...
25 November 2014 4,557 10 View
Hi, I see a lot of people constructing maximum likelihood phylogenetic trees in their studies instead of neighbor joining trees. I checked the web and found no clear definition on when to use what...
30 October 2014 7,615 13 View
