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The values given for the same sample vary between RNA HS (diluted and used, keeping in mind the sensitivity of the kit) and RNA BR.
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We normalize with the housekeeping gene in the qPCR anlaysis. But why we are not normalizing the NGS data with some housekeeping genes for differential gene expression?
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Since our RNA is less abundant, can we use the libraries prepared for RNA-seq to validate (qPCR)the results of RNA-seq.
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My sample of interest is sperm RNA(less abundant and highly fragmented RNA). In that case, to determine the primer efficiency, can i use tissue samples (in which the gene is abundantly expressed)...
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