Shriram Patel

4 Questions 9 Answers 0 Followers

Questions related from Shriram Patel

Can anyone tell me when to use Shannon and Phylogenetic diversity (PD_whole_tree) while calculating species richness in metegenomic data?

Currently I am analyzing amplicon sequencing data generated from diseased and control individuals. In that observed OTUs are more in control individuals but Shannon index is significantly higher...

17 March 2016 2,814 5 View

Any advice on isolating whole milk DNA from milk samples? Which reliable procedure to adopt from a research paper?

Milk contains bacteria (Prokaryotic cells), Somatic Cells (Eukaryotic cells) and fats. I want to extract whole bacterial DNA from it. I have adopted following procedure: Milk samples were...

30 November 2015 9,811 4 View

Would comparing metagenomics data thoroughly in research paper with already existing study decreases weightage of paper?

Hello every one, I want to compare my diseased samples (metagenomic sequences)with control samples already studied in the past. I have also sequenced control samples but not in enough numbers...

20 October 2015 9,322 3 View

Publishing in two different journals with same genomic data set will counted as plagiarism?

Now a days journals like Data in Brief, Genome Announcements and Genomics Data publish short manuscripts or brief data about genomics or metagenomics work. Role of such journals is to inform...

06 August 2015 829 9 View