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Questions related from Shailesh Nair
I have carried bacterial metagenomic analysis between multiple groups (five in total). The groups represent daywise changes in metagenomic contribution. To compare the data taking into account...
21 July 2021 1,598 2 View
I am studying algae-associated symbionts and their ecological importance. I know that bacteria and archaea can contribute nutrients to the host. But can fungi (not fungi-associated...
13 May 2021 7,070 5 View
We have lab established culture setup of marine synechococcus PCC 7002 sp. and heterotrophic bacteria. Recently we did metagenomic analysis of it (sequencing was done by an outside reputed...
13 August 2020 332 11 View
I want to generate a custom database of translated proteins involved in a particular process and then blast them against my predicted protein sequences from the metagenome . I have downloaded all...
13 July 2020 2,865 1 View
Hi, I want to know how efficient are the new metagenomic content prediction tools such as PICRUSt and Piphillin in predicting functions and dynamics ( such as the presence of other genes) using...
07 April 2020 3,782 0 View
We have sequenced Synechococcus sp. PCC 7002 genome. Already the same strain has been sequenced and annotated by many before. Whole-genome map is also available online. The gene of interest is...
18 March 2020 1,107 12 View
we want to carry out transcriptomics study of a mixed marine bacterial community. The experiment is designed as such that we have to preserve the samples for later transcriptomic studies...
27 February 2019 7,305 16 View
