Rucha Wadapurkar

6 Questions 2 Answers 0 Followers

Questions related from Rucha Wadapurkar

Can anybody more elaborate the concept of Minor allele frequency?

I am looking for explanation in the context of NGS variant calling pipeline

28 May 2020 1,060 1 View

Total how many number of cell lines are present for ovarian cancer?

From total number of ovarian cancer cell lines present, for how many cell lines, sequencing data is available?

05 May 2020 3,908 2 View

How to get Consurf analysis result?

Consurf server gives output in number of different ways. But I want result in following format, displayed in image? How to get this?

04 March 2020 3,239 1 View

How to predict 3D model of protein with maximum sequence coverage?

I have used Swissmodel, MODELLER, Phyre, Robetta and I-TASSER for modelling my protein, but in the modelled structure, amino acid is not observed at a specific position to which I want to induce a...

17 January 2020 4,064 1 View

How to visualize binding site residues of docked complex in Pymol?

I have created docked complex.pdbqt file using Autodock and I have uploaded that file in Pymol and visualized formed hydrogen bonds between ligand and protein, but the binding site residues of...

28 March 2019 1,674 11 View

Getting error in cuffmerge step of RNA Seq analysis.How to solve this error?

After running cufflink for two samples of RNA-Seq data, I used cuffmerge and executed the following command cuffmerge -o -g -s assemblies.txt Where assemblies.txt contains the...

12 March 2019 679 3 View