10 Questions 5 Answers 0 Followers
Questions related from Pachineella Lakshmana Rao
RNA structure prediction
02 February 2018 3,983 0 View
why only these denaturants used why not others can anybody give explanation for this?
02 February 2017 6,616 0 View
i am getting big crystals by increasing MPD from 40% to 60%, is the possibility of getting mpd crystals or they are protein crystals, those crystals are not well formed plz give suggestions.
12 December 2016 6,871 1 View
I have done molecular docking of one protein and ligand but i don't know how do i have to calculate free energy in between these two molecules? can you suggest anyone commands related to this?
12 December 2016 2,188 1 View
i have protein dimer sequences of chain A and B, how can i model these two sequences? i want to get as dimer. is there any software ? can you suggest?
10 October 2016 7,108 1 View
How do we have to incorporate metal in model structure of protein? is there any option in autodock? i want to do docking small ligand along with metal?
10 October 2016 9,358 1 View
I have one transcription factor, so how do i have to do dock with DNA? how can i create PDB file of DNA? what is the procedure for simulation in gromacs? can you suggest anyone?
10 October 2016 1,155 0 View
Please can any one suggest me preparation or how to dissolve gingkotoxin for my experiments?
10 October 2016 4,926 4 View
i have modelled one protein by using modeller, after docking protein with suitable ligand, it is interacting with five amino acid residues, then i submitted that complex to 20 ns simulation...
09 September 2016 9,758 3 View
Basically how many nanoseconds we have to use for protein simulation? i used 20 ns for modeled structure, is it sufficient or shall i increase the time? can you suggest anyone?
09 September 2016 5,615 8 View
