Nidhi Katyal

4 Questions 1 Answers 0 Followers

Questions related from Nidhi Katyal

Any suggestions on docking of nanoparticle to protein?

Hi I have tried docking a unit cell of a nanoparticle onto protein (rigid blind docking) using autodock. Is it reasonable enough to assume the docked site (only one site was observed with low...

03 March 2015 6,428 4 View

What is the effect of concentration on nucleus size?

How does nucleus size vary with concentration (in context of protein aggregation)? I understand that nucleus is formed faster at higher concentrations but how does number of molecules in the...

02 February 2015 5,087 1 View

Does anyone have an idea how to convert transition matrix to a new matrix by applying minimum cut maximum flow i.e. ford fulkerson algorithm?

Matlab has an inbuild function but it does not support matrix with reciprocal edges. Any idea how to deal with such matrices?

02 February 2015 7,379 1 View

How to construct a disconnectivity graph?

I would like to do transition network analysis (and thereafter construct the disconnectivity graph). My system consists of a few peptides that cluster during the course of my simulation. I have...

01 January 2015 321 0 View