Munsif ali Shad

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Questions related from Munsif ali Shad

How to model a chimeric protein using two known protein templates structures alternatively?

hi i want to make a chimeric protein model using four switch conformations from template2/proteinB while model the rest of protein from template1/proteinA (as described in example below). can you...

06 January 2021 5,538 0 View

How to model two proteins that bind together? one of them have higher conservation with known structure while the 2nd not?

the 2nd protein is of particular interest as it have two forms. their is an experimental hypothesis that its one form can lead to its self degradation in vitro taking it down from bound complex...

06 October 2020 8,520 1 View

S there a graphical or web based tool to remove inconsistency between amino acid and nucleotide sequences of a gene?

PAL2NAL output ERROR in your input files! #--- ERROR: inconsistency between the following pep and nuc seqs...

28 May 2020 7,368 0 View

primery protien structur domain A is fused into evolutionary conserved domain B how gene fusion between their corresponding genes can be ascertained?

the literature review reveals domain B do exist as general, common and independent proteins and are conserved but domain A is characteristic to protien they form but cant function alone as they...

06 August 2019 3,172 3 View