8 Questions 3 Answers 0 Followers
Questions related from Mohd Muzammil Khan
Hi! While running a script I am getting an error. C:\Users\Muzammil Khan\Desktop\count>python count.py Traceback (most recent call last): File "C:\Users\Muzammil Khan\Desktop\count\count.py",...
08 May 2023 5,762 3 View
Hey ! I am looking for a tool that can provide me the substitution count for the hydrophobic, polar and charged residues in an alignment.
19 April 2023 5,109 0 View
Hey ! I have been looking for the limitations for consurf server. As I have a data file containing 95k sequences but the job in consurf is still processing from last 3 week. So I wanna know is...
21 July 2022 270 2 View
Hi, I have installed trimAL in linux but I don't know how to execute it. I have 20, 000 sequence in which some are very badly aligned so I wont them to be remove.
06 January 2022 1,562 3 View
I have used both software for calculating the 𝚫𝚫G, although they both have different sine convention for defining protein stability/destability. For example what I have observed in my result is...
14 January 2021 3,134 1 View
I have modeled a protein that has 71% similarity and 60% identity to the template but when I visualized and compared I got slight change in interactions although the residue is same and...
11 February 2020 8,142 0 View
I have modeled a protein along with ligand, now I have to check weather that protein pocket is taking up the ligand ?? should I use short distance method for my analysis ?? One more thing can...
04 February 2020 1,137 2 View
Actually I am facing the problem in selecting the best model from the 10 models but In some paper it was given that the best model can be selected on the basis of dope score, whereas in Andrej...
13 December 2019 7,638 3 View
