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Questions related from Marcin Nowicki
Similar to this paper (https://link.springer.com/article/10.1007/s10592-015-0756-7#Sec2), I wish to leverage my allele frequencies in Pop1 (n=47) and Pop2 (n=103), to convert my mixed ploidy...
01 November 2023 5,554 0 View
Hi, Other than randomForest, how do you go about analyzing by GWAS the SNPs genotyping data on categorical phenotypes (say, host species for a pathogen)? Any pointers would be great! -Marcin
13 February 2023 1,210 1 View
Hi all, I'm looking for pieces of software that could compute Maximum Likelihood and Parsimony on mixed-ploidy SSR data (2n though 6n). I can devise sequences, but the crucial points are (1)...
30 April 2021 3,969 1 View
Hi, After comparing multiple (2+) DNA sequences, I want to identify ONLY the restriction sites that changed due to the detected polymorphism. I tried several things by hand, but it's WAY too...
24 September 2020 6,580 4 View
Hello, For our research purposes, we're looking for (citable) resources that would depict LGM maps, especially North America and East Asia (China-Japan-Korea area). On similar issue, maps of...
23 January 2020 7,116 0 View
Hello, In my pipeline for genealogy analyses (diploid SSR, 9 loci, 3pop, 108 individuals), I used DIYABC ver.2.1. 15 scenarios total; pre-eval rejected 8 of them. I want to chop out those...
20 December 2018 3,996 0 View
In our research, we routinely culture P. infestans on several artificial media (and plant leaves), depending on purpose (inoculum preparation, isolate preservation, pathogen genotyping, isolate...
03 August 2016 6,329 4 View
I am looking for techniques allowing to narrow down the randomness of transformation of plant tissue. Is anyone aware whether there are any available? Thanks!
30 March 2014 4,029 2 View
Since I am only starting this project, I wanted some feedback: The idea is to compare two drought systems, a direct one (with funky sensors and water potential), with an indirect one...
21 February 2014 9,470 4 View
