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Questions related from Marcin Nowicki
Similar to this paper (https://link.springer.com/article/10.1007/s10592-015-0756-7#Sec2), I wish to leverage my allele frequencies in Pop1 (n=47) and Pop2 (n=103), to convert my mixed ploidy...
01 November 2023 5,624 0 View
Hi, Other than randomForest, how do you go about analyzing by GWAS the SNPs genotyping data on categorical phenotypes (say, host species for a pathogen)? Any pointers would be great! -Marcin
13 February 2023 1,276 1 View
Hi all, I'm looking for pieces of software that could compute Maximum Likelihood and Parsimony on mixed-ploidy SSR data (2n though 6n). I can devise sequences, but the crucial points are (1)...
30 April 2021 4,037 1 View
Hi, After comparing multiple (2+) DNA sequences, I want to identify ONLY the restriction sites that changed due to the detected polymorphism. I tried several things by hand, but it's WAY too...
24 September 2020 6,663 4 View
Hello, For our research purposes, we're looking for (citable) resources that would depict LGM maps, especially North America and East Asia (China-Japan-Korea area). On similar issue, maps of...
23 January 2020 7,156 0 View
Hello, In my pipeline for genealogy analyses (diploid SSR, 9 loci, 3pop, 108 individuals), I used DIYABC ver.2.1. 15 scenarios total; pre-eval rejected 8 of them. I want to chop out those...
20 December 2018 4,051 0 View
Hi everyone, My computers just won't run Vista viewer Phylo module (genome.lbl.gov/vista/index.shtml) in browser (Opera, Mozilla, Chrome, Edge...), with Win10 and latest Java. Does anyone know,...
28 June 2017 6,024 0 View
In our research, we routinely culture P. infestans on several artificial media (and plant leaves), depending on purpose (inoculum preparation, isolate preservation, pathogen genotyping, isolate...
03 August 2016 6,415 4 View
I am looking for techniques allowing to narrow down the randomness of transformation of plant tissue. Is anyone aware whether there are any available? Thanks!
30 March 2014 4,082 2 View
Since I am only starting this project, I wanted some feedback: The idea is to compare two drought systems, a direct one (with funky sensors and water potential), with an indirect one...
21 February 2014 9,513 4 View
Is anyone familiar with the detailed lineage of tomato S. pimpinellifolium line West Virginia 700? First mention of this line is in Gallegly 1960. Any more detailes are higly appreciated.
12 June 2013 3,246 2 View
For our upcoming research, my lab is seeking for seeds of Arabidopsis F2 or further generation(s) cross between Col and Tsu ecotypes (either direction). Plants of these ecotypes show contrasting...
01 January 1970 7,551 1 View
