Kumari Uma Mahto

7 Questions 7 Answers 0 Followers

Questions related from Kumari Uma Mahto

What should be done if the modelled protein structure fails to pass VERIFY3D?

After refining the protein structure multiple times, it still fails to pass VERIFY3D. The ERRAT score is 96.9298 and PROCHECK results are fine. What can be done to improve the VERIFY3D results?

24 April 2023 6,705 3 View

Problem in protein structure prediction using AlphaFold and subsequent docking using Autodock?

After the protein structure prediction using AlphaFold2, I want to proceed with molecular docking in Autodock. However, the modelled protein structure cannot be opened using Autodock with the...

04 January 2023 8,561 10 View

What is the difference between GC-MS and HRMS?

What is the difference between GC-MS and HRMS? Which is better for identification of compounds in a crude extract (mixture of compounds)?

13 July 2021 498 6 View

How to analyze biofilm images in COMSTAT?

I want to analyze the biofilm images obtained in CLSM through COMSTAT. I am using COMSTAT 2.1 Image J plugin. The workflow I am following is : 1. Import all the images in image J of a single...

04 March 2021 8,462 0 View

Will my revised and resubmitted paper be regarded as a new submission?

The editor commented that the manuscript in the current format is unsuitable for acceptance. However, the editor recommend to revise the manuscript in accordance with the reviewers comment and...

31 July 2020 6,409 4 View

What may be the possible reasons for getting only a single band during plasmid isolation?

Plasmids are always present in multiple forms. What might be the issue with my strain?

12 January 2019 5,203 1 View

How can we measure corrosion due to biofilm formation?

Pseudomonas aeruginosa forms biofilm on different surfaces viz., glass, polystyrene, steel, ceramic and rubber. How can we quantify if the surfaces are being corroded after biofilm formation?

01 January 1970 7,647 5 View