Chandandeep Kaur

7 Questions 8 Answers 0 Followers

Questions related from Chandandeep Kaur

Can the relative abundance be more while diversity indexes are low?

Under the influence of inoculating organism in the soil can relative abundance exceeds while diversity indexes like shannon, simpson are low

21 April 2021 5,081 11 View

Does Shannon index represent largest diversity index when the individual belongs to different species and vice versa?

The shannon wiener index and Simpson indices include the measurement of community heterogeneity. Shannon wiener index bapplied information theory. The main measuring object of information theory...

23 October 2020 1,396 7 View

Can Gram negative genera be inhibited by Gram positive genera in soil?

Can Proteobacteria and Burkholderiales being Gram-negative (thin cell wall) be easily destroyed by antimicrobial producing Gram-positive genera for instance Actinobacteria and Salinospora in soil?

19 October 2019 2,641 3 View

Is it possible to have abundant Gram positive genera in soil having dominant Proteobacteria? If yes what can be the possible reasoning?

In one of the recent metagenomic study performed by me, I found the above observation. Looking for expert advice on this

31 January 2018 2,051 7 View

How to cluster 16S fastQ files and run on Prodigal to determine the genes in metagenomic sample?

I have done metagenomic sequencing on Illumina : amplicon of 16s rRNA (V3-V4) and want to analyse the functional genes by utilising prokaryotic dynamic programming gene defining algorithm...

14 July 2017 2,912 1 View

How malic acid or other organic acids are produced by Gram negative bacteria and what enzymes/cofactors are involved?

Since, gluconic acid/2-ketogluconic acid is produced via oxidation of glucose using PQQ dependant GDH and GaDH. Gluconic acid/2-ketogluconic acid are known as principal organic acids responsible...

19 July 2016 4,415 2 View

What would be the ideal conditions of HPLC for organic acid detection? Which mobile phase and column is suitable, as organic acids are hydrophilic?

Analytical method for organic acid detection using HPLC

19 August 2014 1,625 11 View