11 Questions 24 Answers 0 Followers
Questions related from Ankit Agrawal
Hi, I am trying to develope a MD simulation model for the growth of cells in LAMMPS. I am conisdering each cell as an analog to finite size particle. The cells are intitially as small and as they...
28 May 2020 9,930 1 View
HI, I have a 3D object whose shape is irregular. Shape of object can be both convex or non convex type. The shape of object is defined by triangulated mesh. So, I have the vertex and edge...
08 April 2019 9,074 4 View
Hi, Which software would you recommend to do 3-d bio and medical image analysis/processing. I heard some good library in ImageJ, MATLAB, CellProfiler and ICY. Which one should I start learning...
30 October 2018 9,055 3 View
Hi, Nowadays, there are so many RNA detected so it is difficult to keep track of all the RNAs. Recently, I read about enhancer RNA that it is part of noncoding trancripts. I also read about...
31 January 2018 3,849 4 View
Does anyone know the publicly available imaging data of microscopy techniques for developing embryo, cell shape etc.
03 November 2016 5,751 3 View
Hello Everyone, I have bunch of RNASeq data of differential expressed gene. I wanted to find the transcription factor binding site of these gene. How can i find? Do i need to see the pathway...
28 July 2016 4,986 7 View
Hello everyone, In all theses methods like 3C, 4C, 5C, (Hi-C) what are the relative difference of contact frequency between intra chromosomal interaction and inter chromosomal interaction. Can we...
12 April 2016 333 5 View
I am using different clustering methods which gives different clustering output. I need to benchmark to find out which clustering method is the best. I have 20-25 clusters and 25000 samples. I...
01 January 1970 8,796 6 View
Hi, I have a computational biology backgroud and right now studying how the cells are organized in a tissue. Someone told me that my cells are orientated in specific manner so it has some kind of...
01 January 1970 5,378 3 View
I want to understand the difference between PCA (principal component analysis) and NMF (non-negative matrix factorization) in terms of explaining variability. When we apply PCA into...
01 January 1970 7,571 6 View
Hi, I have confusion about the the number of nucleolus present in human cell nuclei. What is the relationship between cell cycle stage and size & number of nucleoli present in nucleus. The...
01 January 1970 264 10 View
