13 Questions 116 Answers 0 Followers
Questions related from Andrii Tarieiev
I would appreciate it very much if RG members could suggest any good and (preferably GPL) alternative to GeneMapper and Geneious software for microsatellite (SSR) analysis. Thanks.
11 May 2023 830 3 View
I tried to open FCS files (originally generated by FloMax and CyFlow software) using R package flowCore, but it returned incorrect values. When I tried to make a density plot, it became evident...
16 December 2021 2,106 0 View
I would like to know whether it is possible to run PAUP on Linux with Open MPI or not. I tried to do so, but not succeeded so far. Thank you.
31 May 2021 8,697 2 View
I have a need to search for single-copy conservative orthologs within several plant genomes and used BUSCO tool for that. However, I found that the results produced by different versions on the...
30 January 2021 8,287 6 View
I would like to use RAxML for constructing ML phylogenetic tree based on rRNA structural alignment. However, the secondary structures across the alignment are slightly different, and RAxML accepts...
20 November 2019 1,599 1 View
I'm working with plant species with weak reproductive barriers and find that some species contains organisms with different ploidy. I'm interested to know how the fact of different ploidy levels...
26 May 2015 4,055 12 View
I try to make a low-level phylogeny based on highly variable cp-spacers. But after PCR, cloning and sequencing I obtained quite different products from 1 organism. It's looks like quite strange,...
16 March 2015 8,402 6 View
I try to find exact location of locus classicus for Betula pendula Roth and Betula pubescens Ehrhardt . There are no data about area of type specimens collection in protologues and herbaria. Maybe...
05 November 2014 8,485 9 View
Who can offer advice on the techniques to use for karyotyping and chromosome counting in birch species? These plants have many small chromosomes (usually 28 or 56 in general cases) and chromsome...
06 March 2013 8,549 1 View
There are many formulas and program applications to compute melting temperature and annealing temperature of PCR primers nowadays, but these tools usually have different results. Would you be so...
01 March 2013 9,394 25 View
I need to compare some sequences longer than 10Mb. What kind of software is the best for such work? Can I do this work locally (without internet sources)? If I have sequences in FASTAQ format, I...
25 January 2013 9,797 5 View
We work with one genus Betula on the territory of Ukraine. We try to diverse different taxa in this genus based on molecular markers. But we have a problem, that traditional molecular markers...
11 December 2012 8,460 37 View
Dear colleagues, As you know 15.11.2023 ResearchGate announced its partnership with MDPI...
01 January 1970 6,046 12 View
